BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G12SP1|AL425768
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 855 0.0
>3x_Contig1802
Length = 45229
Score = 855 bits (430), Expect = 0.0
Identities = 434/436 (99%)
Strand = Plus / Minus
Query: 1 tcggcaagatcttcaggaacttcctccgcagcggcaactttttgtttcttagggcgcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcggcaagatcttcaggaacttcctccgcagcggcaactttttgtttcttagggcgcggc 381
Query: 61 tgttgagatgattccgtttcgttctcttctgctttccctgtcggcgaattagctgattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgttgagatgattccgtttcgttctcttctgctttccctgtcggcgaattagctgattcc 321
Query: 121 ttggcagcaccttcagattcatcagcaaatgtgacttgttttgtagctgtagtatctgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttggcagcaccttcagattcatcagcaaatgtgacttgttttgtagctgtagtatctgcg 261
Query: 181 gcatcagcagtcgattctttttcgctaccagatctcccttctgtatcgtgttcgacatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcatcagcagtcgattctttttcgctaccagatctcccttctgtatcgtgttcgacatct 201
Query: 241 tccttttcatcggtgtttccgccatggggttggtcttctttgttttcactttcgtcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tccttttcatcggtgtttccgccatggggttggtcttctttgttttcactttcgtcatca 141
Query: 301 atgcctcgcttttgtgaacgtgtcaaccttgtagagcgtcttgtccttggtttcttatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 140 atgcctcgcttttgtgaacgtgtcaaccttgtagagcgtcttgtccttggttttttatga 81
Query: 361 gcatcgacaggttcatcgacaggttcattcgccagtwcgctcacagattctccaacactg 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 80 gcatcgacaggttcatcgacaggttcattcgccagttcgctcacagattctccaacactg 21
Query: 421 actggcggagtggtcg 436
||||||||||||||||
Sbjct: 20 actggcggagtggtcg 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5100
Number of Sequences: 1807
Number of extensions: 5100
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)